CDS

Accession Number TCMCG051C34896
gbkey CDS
Protein Id XP_024438555.1
Location join(1620165..1620914,1621716..1622186,1622474..1622722,1623277..1623519,1624136..1624218,1624335..1624443,1624536..1624662,1624777..1624796)
Gene LOC7496406
GeneID 7496406
Organism Populus trichocarpa

Protein

Length 683aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024582787.1
Definition RNA-binding KH domain-containing protein RCF3 isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category A
Description KH domain-containing protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K21444        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0002831        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009408        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009753        [VIEW IN EMBL-EBI]
GO:0009755        [VIEW IN EMBL-EBI]
GO:0009867        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010286        [VIEW IN EMBL-EBI]
GO:0010445        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031050        [VIEW IN EMBL-EBI]
GO:0031053        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032101        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0035195        [VIEW IN EMBL-EBI]
GO:0035196        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043331        [VIEW IN EMBL-EBI]
GO:0043900        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070878        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070918        [VIEW IN EMBL-EBI]
GO:0071229        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071359        [VIEW IN EMBL-EBI]
GO:0071395        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1900150        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGACAGATCTAGATCCAAGAGAAACTACTACTATGACCATCAAGATTATGACAATGACAACCTCAACAACAACAACATGACTAGGACGACCAAACCCAGATACAACAATAACAACAACAACAATTATTACCGTCACCGTGGACAAGGAGGCAACAACATGTTCAACAACAACAACAACAGGTTTTCAAGAACCCAACAGCAGCAGCAACCACAGCAACAGCAGCAGCAACAAGACCAATCATCGTCATTAATGGTGACAACAAGTTACAGAATTTTATGTCATGATATGAAAGCAGGAGGAGTAATTGGGAAGTCGGGGAGTATAATAAAGTCAATTAGGCAACACACAGGGGCGTGGATTAATGTTCATGAGTTGATTCCTGGTGACGAGGAGAGAATTATTGAGATTTCGGATACGCGTAGGAGAGACCCAGAAGGGAGAATGCCTTCCTTTTCGCCAGCGCAAGAGGCGCTCTTCTTGATACATGATAGGATTCTTGAGAATGATTTGCAGTATGGGGTGGTGAGTAGTGGTGTTGGTGGGTTGGAAGAGGATGAGTATGTGGGGAGAGGAGGAAATAGAGTGGCTACCAGGTTGGTTGTTTCTAGAATGCACGTGGGTTGTTTGTTAGGAAAAGGGGGGAAGATTATTGAGCAAATGAGGATGGAAACAAAGACCCAGATTAGGATTTTGCCTAGAGATCATACTTTGCCAAGATGTGTTTCCATGTCTGAGGAGATTGTTCAGGTTGTTGGTGATGTCAGTGCTGTGAAAAATGCCGTTGCGATTATTTCATCAAGATTGAGAGAGAGTCAGCATCGTGACCGCAGTCATTTTCATGGACGAGTTCACTCACCAGAACGGCTTTTTGATGATGATTATGTTCCTCACATGAATACACGTCGTTCCTCGATGGATGGACCACCCTCCTTTGGCTCACGAGTACCTGGTTCCAACTACAGAAACAATAACTATTCCTCACGAGCATCTGGTTTTGCTGCTGATGCTGGGGCTGATCCCATTGCTGACAGTGCACAGCCCTTTTATGTTGAGGACCTTGTGTTTCGAATCCTTTGCCCAATTGACAAACTTAATAGAGTTGTAGGAGAGTCTGATGGCATAGTGGACTTGCTTCAAAATGAAATTGGTGTGGATGTTAAGGTCGCTGATCCTGTCTCTGGTTCTGATGAACAGATAATCACCATTTTCTCCGAGGAGGGTCCTGATGATGAGCTGTTTCCTGCTCAAGAAGCTTTGTTACACATTCAAACTCGCATTGTTGATCTTGTTCCAGATAATGACCACATAACAACAACTAGGTTACTTGTCCGGTCTAGTGAGATTGGGTGTTTAGAGGGAAGAGATGCCTCATTATCTGAGATAGAAAGGTTAACTGGTGCAACAATAGAGATCTTGCCAAAGGAAAAGCTTCCATCATATCTATCGGGGATAGATGAGATTGTACAGATTGAAGGGGAAATAAGGGCAGCTCGTGATGCTCTTGTTGAAGTGACATCAAGACTTCGGAGTTACATATACAAGGATGTCTTTGAAAAGGACCTGCCACCACCTCTGTCTGCACCAGGCCTTGCTGGAGGAATGCAGGCAGCTTCTCCAAGCCCAACTCCAGCTCGTGAAGGGCCCATTGGTGGTGATCCTCCTGCTAGCTACCAGAATGTACAGTCTGCTGCAACACCACAGCCATCAAAGGATGCTAGAGGATCTAGTGTTGAAGCAGTGAAGCAGAATGAAAGTGAACGTCGTGAAGAATTGCCTATTACTACGATGAATAGAATCCCTGTAACACTTGTCACTAGGAGTACACTTGAAGTTGTCATACCAGAGCCTGCGGTCCCCAAGCTCATTACAAAATCAAAAAACAAGCTTGCACAGATTAGTGAGTTATCTGGAGCCAATGTAACCCTTGTTGAAGATAGACCGGATGTGAAAGAAAAGATTATAAAAATATCTGGAACACCAGAGCAGGCAGAGAGAGCTCAGAGCTTGCTTCAAGGCTTTATTTTAAGCACACAAGAAGATGGACCTTAG
Protein:  
MDRSRSKRNYYYDHQDYDNDNLNNNNMTRTTKPRYNNNNNNNYYRHRGQGGNNMFNNNNNRFSRTQQQQQPQQQQQQQDQSSSLMVTTSYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGRMPSFSPAQEALFLIHDRILENDLQYGVVSSGVGGLEEDEYVGRGGNRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHTLPRCVSMSEEIVQVVGDVSAVKNAVAIISSRLRESQHRDRSHFHGRVHSPERLFDDDYVPHMNTRRSSMDGPPSFGSRVPGSNYRNNNYSSRASGFAADAGADPIADSAQPFYVEDLVFRILCPIDKLNRVVGESDGIVDLLQNEIGVDVKVADPVSGSDEQIITIFSEEGPDDELFPAQEALLHIQTRIVDLVPDNDHITTTRLLVRSSEIGCLEGRDASLSEIERLTGATIEILPKEKLPSYLSGIDEIVQIEGEIRAARDALVEVTSRLRSYIYKDVFEKDLPPPLSAPGLAGGMQAASPSPTPAREGPIGGDPPASYQNVQSAATPQPSKDARGSSVEAVKQNESERREELPITTMNRIPVTLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVKEKIIKISGTPEQAERAQSLLQGFILSTQEDGP